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Analytical methods

Comparative study #1
Chromatography LC
Ion source ESI
Positive/Negative mode both
Mass analyzer Q-TOF
Identification level MS/MS

Sample information

Comparative study #1
Country China
Specimen Serum
Marker function diagnosis
Participants(Case) Cancer type LCC, ADC, SCC, SCLC
StageI, II, III, IV
Number39
Gender (M,F)21, 23
Mean age (range) (M,F)
Smoking status
Participants(Control) Type healthy control
Number40
Gender (M,F)18, 27
Mean age (range) (M,F)
Smoking status

Data processing and metabolite identification

Data processing software XCMS, CAMERA, metaX
Database search KEGG, HMDB

Statistical analysis

Differential analysis method Student’s t-test, PLS-DA,
Classification method
Survival analysis method

Lung cancer-related metabolites identified in the paper

Metabolite Author-emphasized biomarkers Mean concentration (case) Mean concentration (control) Fold change (case/control) P-value FDR VIP
12S-HHT 4.34 1.09e-06 3.84
LysoPC 14:0 3.68 1.73e-07 3.52
beta-Santalyl acetate 3.37 1.24e-06 3.41
LysoPC 16:1 3.16 5.06e-07 3.29
3-cyclohexyl-1,1-dimethylurea 3.12 1.49e-12 4.67
acetyl-DL-carnitine 2.96 1.34e-05 2.89
docosatrienoic acid 2.85 5.11e-13 4.06
Plasmenyl-PC 16:0; PC(P-14:0/2:0) 2.84 1.01e-07 3.23
LysoPE 18:3 2.64 7.16e-08 3.14
8Z,14Z-Eicosadienoic acid 2.42 4.10e-03 1.79
5-hydroxy-6E,8Z,11Z,14Z-eicosatetraenoic acid, 1,5-lactone 2.40 2.12e-04 2.67
LysoPE 18:2 2.32 1.76e-07 2.97
desmethylofloxacin 2.31 0.03 1.30
PC 9:0; PC(4:0/5:0) 2.24 9.40e-10 3.23
LysoPA 18:2; LysoPA 18:2 2.24 7.19e-04 2.28
LysoPC 18:3 2.20 1.07e-06 2.75
LysoPE 22:6 2.18 1.31e-05 2.67
LysoPE 20:3 2.17 1.59e-07 2.85
linoleoylcarnitine 2.14 1.83e-09 3.08
LysoPE 18:1 2.11 1.33e-07 2.85
dehydrocarpaine I 2.10 7.07e-04 2.09
TG 62:17; TG(18:4/22:6/22:7) 2.07 1.67e-06 2.65
LysoPE 22:5 2.06 1.87e-03 1.91
TG 66:21; TG(22:7/22:7/22:7) 2.04 2.29e-05 2.52
Plasmenyl-PE 18:0; PE(P-15:0/3:0) 2.03 1.47e-05 2.45
11.alpha.-Hydroxyprogesterone .beta.-D-glucuronide 2.02 1.57e-09 3.01
LysoPE 16:0 2.01 2.64e-08 2.86
omega.-3 Arachidonic acid methyl ester 2.01 3.37e-05 2.48
acrolein 1.98 7.54e-08 2.76
Trp-Leu 1.96 1.45e-13 3.32
riboflavin 1.93 7.98e-03 1.65
5-hexyltetrahydro-2-furanoctanoic acid 1.92 3.88e-07 2.71
Neurine 1.90 6.78e-09 2.96
Trp-Glu 1.90 3.86e-10 2.95
LysoPC 15:0 1.89 7.86e-05 2.20
8-HETrE 1.88 5.47e-03 1.94
LysoPE 20:4 1.88 1.49e-07 2.65
PC(16:0/20:3(5Z,8Z,11Z)) 1.88 4.40e-03 1.51
12R-Hydroxy-5Z,8Z,10E,14Z-eicosatetraenoic acid 1.87 0.01 1.96
ormosanine 1.87 3.76e-09 2.71
LysoPC 22:5 1.85 4.36e-05 2.28
L-propionylcarnitine 1.83 5.51e-04 2.14
LysoPC 20:5 1.83 0.01 1.94
oleoyl-L-carnitine 1.83 5.79e-06 2.42
pyruvic acid 1.83 3.81e-06 2.39
7-hydroxyquetiapine 1.80 1.63e-04 2.15
LysoPC 22:6 1.78 2.15e-03 1.90
N-lactoyl-leucine 1.76 2.21e-04 2.13
PC(18:3(6Z,9Z,12Z)/16:0) 1.75 0.01 1.64
germbudine 1.74 6.40e-08 2.50
LysoPE 18:0 1.72 1.17e-04 2.12
ent-16b,19-Kauranediol 19-acetate 1.72 8.22e-03 1.91
LysoPC 20:3 1.71 9.32e-07 2.33
8(9)-epoxy-5Z,11Z,14Z-eicosatrienoic acid 1.70 1.11e-05 2.32
Plasmenyl-PC 18:0; PC(P-14:0/4:0) 1.69 4.95e-07 2.34
palmitoylcarnitine 1.68 1.08e-06 2.33
(S)-Reticuline 1.68 1.62e-04 2.00
linoleic acid 1.68 6.17e-03 1.73
1,2-Di-(9Z,12Z,15Z-octadecatrienoyl)-sn-glycero-3-phosphocholine 1.67 5.34e-03 1.54
adipoyl-L-carnitine 1.67 2.01e-04 2.02
acylcarnitine 18:3 1.66 7.05e-06 2.24
methyl .gamma.-linolenate 1.66 3.68e-03 1.56
cocaine 1.65 1.51e-04 2.36
irbesartan 1.65 2.69e-07 2.34
11,14,17-eicosatrienoic acid, (Z,Z,Z)- 1.64 2.09e-05 2.13
LysoPC 17:1 1.63 2.08e-05 2.03
1-(3-(Trifluoromethyl)phenyl)piperazine 1.62 4.34e-04 1.81
pyroglutamic acid 1.62 1.28e-05 2.16
drofenine 1.62 2.69e-10 2.53
glutamyltryptophan 1.61 3.63e-05 2.32
3-tert-Butyl-4-hydroxyanisole 1.61 1.33e-03 1.89
acylcarnitine 20:3 1.60 1.80e-04 2.04
6-(3-Dimethylaminopropionyl)forskolin 1.59 3.08e-03 1.66
acylcarnitine 16:1 1.59 1.80e-03 1.75
LysoPC 20:4 1.59 5.36e-04 1.95
butaprost (free acid) 1.59 0.03 1.49
4-methylumbelliferone 1.58 1.24e-04 1.96
LysoPC 18:0 1.57 5.16e-03 1.57
LysoPS 20:4; LysoPS 20:4 1.56 2.97e-06 2.25
stearamide 1.56 0.03 1.30
LysoPC 16:0 1.56 7.60e-07 2.12
acylcarnitine 20:2 1.55 7.58e-06 2.02
chloridazone-methyl-desphenyl 1.54 2.19e-05 2.03
PC(18:2(9Z,12Z)/18:2(9Z,12Z)) 1.54 0.04 1.37
2S-Amino-4E-octadecene-1,3S-diol 1.54 3.25e-06 2.00
9-oxoprosta-10,12Z,14E-trienoic acid 1.53 5.55e-03 1.57
2,2,6,7-Tetramethylbicyclo[4.3.0]nona-1(9),4-diene-7,8-diol 1.52 2.91e-03 1.57
methyl dihydrojasmonate 1.52 9.17e-03 1.33
perfluoroundecanoic acid 1.52 0.04 1.45
drostanolone 1.52 2.39e-03 1.62
acylcarnitine 20:1 1.50 4.80e-03 1.65
3-decen-2-one 1.50 7.72e-03 1.84
Plasmenyl-PC 44:5; PC(P-22:0/22:5) 1.50 2.37e-04 1.76
8-isoprostaglandin E2 0.66 1.26e-03 2.02
hypoxanthine 0.66 1.19e-03 3.09
2-butyl-4-methylphenol 0.66 7.78e-04 2.27
AcylGlcADG 66:18; AcylGlcADG(22:6/22:6/22:6) 0.66 6.04e-09 2.36
isopropyl tiglate 0.64 2.10e-03 2.09
indoxyl sulfate 0.63 7.97e-03 2.04
paraxanthine 0.63 0.03 2.26
decanoyl-L-Carnitine 0.63 7.68e-04 2.35
octanoylcarnitine 0.62 8.04e-04 2.17
theobromine 0.60 8.60e-03 3.03
inosine 0.60 1.52e-03 3.25
5.alpha.-Androstan-3.beta.-ol-17-one sulfate 0.59 3.80e-03 2.58
acylcarnitine 13:1 0.59 6.36e-04 1.98
cyclamate 0.58 0.03 2.07
1,2,3-Trihydroxybenzene 0.57 0.04 2.01
trandolaprilat 0.57 0.03 1.66
perfluorooctanoic acid 0.56 1.31e-03 2.65
acylcarnitine 11:0 0.56 2.75e-06 2.57
acylcarnitine 13:0 0.56 3.36e-03 1.99
O2'-4a-cyclic-tetrahydrobiopterin 0.55 2.90e-05 2.63
3,4,5-trimethoxycinnamic acid 0.55 5.16e-03 2.22
catechol 0.54 2.12e-03 2.57
pyrocatechol sulfate 0.52 1.92e-03 2.80
2-Amino-3,4-dimethylimidazo[4,5-f]quinoline 0.50 1.36e-03 2.70
His-Thr 0.49 1.57e-03 2.78
D8'-Merulinic acid A 0.48 8.68e-03 1.99
2,4-dihydroxyacetophenone 5-sulfate 0.40 5.56e-03 2.17
perfluorohexane sulfonic acid 0.39 2.94e-04 2.87
Metabolite Author-emphasized biomarkers Cutoff value AUROC (95%CI) Sensitivity (%) Specificity (%) Accuracy (%)
12S-HHT
LysoPC 14:0 0.895
beta-Santalyl acetate
LysoPC 16:1
3-cyclohexyl-1,1-dimethylurea
acetyl-DL-carnitine
docosatrienoic acid
Plasmenyl-PC 16:0; PC(P-14:0/2:0)
LysoPE 18:3 0.908
8Z,14Z-Eicosadienoic acid
5-hydroxy-6E,8Z,11Z,14Z-eicosatetraenoic acid, 1,5-lactone
LysoPE 18:2
desmethylofloxacin
PC 9:0; PC(4:0/5:0)
LysoPA 18:2; LysoPA 18:2
LysoPC 18:3 0.893
LysoPE 22:6
LysoPE 20:3
linoleoylcarnitine
LysoPE 18:1
dehydrocarpaine I
TG 62:17; TG(18:4/22:6/22:7)
LysoPE 22:5
TG 66:21; TG(22:7/22:7/22:7)
Plasmenyl-PE 18:0; PE(P-15:0/3:0)
11.alpha.-Hydroxyprogesterone .beta.-D-glucuronide
LysoPE 16:0
omega.-3 Arachidonic acid methyl ester
acrolein
Trp-Leu
riboflavin
5-hexyltetrahydro-2-furanoctanoic acid
Neurine
Trp-Glu
LysoPC 15:0
8-HETrE
LysoPE 20:4
PC(16:0/20:3(5Z,8Z,11Z))
12R-Hydroxy-5Z,8Z,10E,14Z-eicosatetraenoic acid
ormosanine
LysoPC 22:5
L-propionylcarnitine
LysoPC 20:5
oleoyl-L-carnitine
pyruvic acid
7-hydroxyquetiapine
LysoPC 22:6
N-lactoyl-leucine
PC(18:3(6Z,9Z,12Z)/16:0)
germbudine
LysoPE 18:0
ent-16b,19-Kauranediol 19-acetate
LysoPC 20:3
8(9)-epoxy-5Z,11Z,14Z-eicosatrienoic acid
Plasmenyl-PC 18:0; PC(P-14:0/4:0)
palmitoylcarnitine
(S)-Reticuline
linoleic acid
1,2-Di-(9Z,12Z,15Z-octadecatrienoyl)-sn-glycero-3-phosphocholine
adipoyl-L-carnitine
acylcarnitine 18:3
methyl .gamma.-linolenate
cocaine
irbesartan
11,14,17-eicosatrienoic acid, (Z,Z,Z)-
LysoPC 17:1
1-(3-(Trifluoromethyl)phenyl)piperazine
pyroglutamic acid
drofenine
glutamyltryptophan
3-tert-Butyl-4-hydroxyanisole
acylcarnitine 20:3
6-(3-Dimethylaminopropionyl)forskolin
acylcarnitine 16:1
LysoPC 20:4
butaprost (free acid)
4-methylumbelliferone
LysoPC 18:0
LysoPS 20:4; LysoPS 20:4
stearamide
LysoPC 16:0
acylcarnitine 20:2
chloridazone-methyl-desphenyl
PC(18:2(9Z,12Z)/18:2(9Z,12Z))
2S-Amino-4E-octadecene-1,3S-diol
9-oxoprosta-10,12Z,14E-trienoic acid
2,2,6,7-Tetramethylbicyclo[4.3.0]nona-1(9),4-diene-7,8-diol
methyl dihydrojasmonate
perfluoroundecanoic acid
drostanolone
acylcarnitine 20:1
3-decen-2-one
Plasmenyl-PC 44:5; PC(P-22:0/22:5)
8-isoprostaglandin E2
hypoxanthine 0.769
2-butyl-4-methylphenol
AcylGlcADG 66:18; AcylGlcADG(22:6/22:6/22:6) 0.906
isopropyl tiglate
indoxyl sulfate
paraxanthine
decanoyl-L-Carnitine
octanoylcarnitine
theobromine
inosine
5.alpha.-Androstan-3.beta.-ol-17-one sulfate
acylcarnitine 13:1
cyclamate
1,2,3-Trihydroxybenzene
trandolaprilat
perfluorooctanoic acid
acylcarnitine 11:0 0.854
acylcarnitine 13:0
O2'-4a-cyclic-tetrahydrobiopterin
3,4,5-trimethoxycinnamic acid
catechol
pyrocatechol sulfate
2-Amino-3,4-dimethylimidazo[4,5-f]quinoline
His-Thr
D8'-Merulinic acid A
2,4-dihydroxyacetophenone 5-sulfate
perfluorohexane sulfonic acid

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