Analytical methods | ||
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Comparative study | #1 | |
Chromatography | GC | |
Ion source | – | |
Positive/Negative mode | – | |
Mass analyzer | – | |
Identification level | – |
Sample information | ||
---|---|---|
Comparative study | #1 | |
Country | China | |
Specimen | serum | |
Marker function | diagnosis | |
Participants(Case) | Cancer type | NSCLC |
Stage | I, II, III, IV | |
Number | 30 | |
Gender (M,F) | 0, 30 | |
Mean age (range) (M,F) | 60.4 ± 9.7 | |
Smoking status | non-smoker | |
Participants(Control) | Type | healthy |
Number | 30 | |
Gender (M,F) | 0, 30 | |
Mean age (range) (M,F) | 54.7 ± 14.3 | |
Smoking status | non-smoker |
Data processing and metabolite identification | |
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Data processing software | – |
Database search | – |
Statistical analysis | |
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Differential analysis method | PCA, PLS-DA, Mann-Whitney U test |
Classification method | – |
Survival analysis method | – |
Metabolite | Author-emphasized biomarkers | Mean concentration (case) | Mean concentration (control) | Fold change (case/control) | P-value | FDR | VIP |
---|---|---|---|---|---|---|---|
oxalic acid | – | – | – | 3.95 | 1.00e-03 | 1.00e-03 | 1.56 |
phosphate | – | – | – | 3.40 | 1.00e-03 | 1.00e-03 | 2.15 |
isocitrate | – | – | – | 3.35 | 1.00e-03 | 1.00e-03 | 1.59 |
pyruvic acid | – | – | – | 2.56 | 1.00e-03 | 1.00e-03 | 1.81 |
glycolic acid | – | – | – | 1.50 | 1.00e-03 | 1.00e-03 | 1.36 |
fumaric acid | – | – | – | 1.15 | 0.02 | 0.04 | 1.38 |
hydroxylamine | – | – | – | 1.15 | 6.00e-03 | 0.01 | 1.07 |
porphine | – | – | – | 1.15 | 1.00e-03 | 3.00e-03 | 1.03 |
leucine | – | – | – | 0.89 | 1.00e-03 | 1.00e-03 | 1.47 |
cholesta-3,5-diene | – | – | – | 0.86 | 2.00e-03 | 6.00e-03 | 1.06 |
stearic acid | – | – | – | 0.85 | 1.00e-03 | 1.00e-03 | 1.21 |
hydroxyurea | – | – | – | 0.85 | 1.00e-03 | 1.00e-03 | 1.14 |
cholesterol | – | – | – | 0.84 | 1.00e-03 | 1.00e-03 | 1.51 |
beta-alanine | – | – | – | 0.83 | 1.00e-03 | 3.00e-03 | 1.09 |
palmitic acid | – | – | – | 0.82 | 1.00e-03 | 1.00e-03 | 1.16 |
2-hydroxyglutaric acid | – | – | – | 0.81 | 1.00e-03 | 1.00e-03 | 1.18 |
docosahexaenoic acid | – | – | – | 0.79 | 3.00e-03 | 8.00e-03 | 1.08 |
2-monopalmitoylglycerol | – | – | – | 0.79 | 1.00e-03 | 1.00e-03 | 1.12 |
11,14-eicosadienoic acid | – | – | – | 0.79 | 8.00e-03 | 0.02 | 1.08 |
myristic acid | – | – | – | 0.77 | 1.00e-03 | 0.02 | 1.03 |
pyroglutamic acid | – | – | – | 0.77 | 1.00e-03 | 1.00e-03 | 1.47 |
lauric acid | – | – | – | 0.77 | 1.00e-03 | 1.00e-03 | 1.11 |
linoleic acid | – | – | – | 0.77 | 1.00e-03 | 1.00e-03 | 1.37 |
glyceric acid | – | – | – | 0.74 | 1.00e-03 | 1.00e-03 | 1.39 |
glycerol | – | – | – | 0.74 | 1.00e-03 | 1.00e-03 | 1.34 |
7,10,13,16-docosatetraenoic acid | – | – | – | 0.73 | 1.00e-03 | 1.00e-03 | 1.11 |
L-threonic acid | – | – | – | 0.72 | 1.00e-03 | 1.00e-03 | 1.25 |
citrulline | – | – | – | 0.68 | 1.00e-03 | 1.00e-03 | 1.46 |
phenylalanine | – | – | – | 0.68 | 1.00e-03 | 1.00e-03 | 1.76 |
9-octadecenoic acid, methyl ester | – | – | – | 0.68 | 1.00e-03 | 1.00e-03 | 1.04 |
linolenic acid | – | – | – | 0.67 | 1.00e-03 | 3.00e-03 | 1.22 |
glycine | – | – | – | 0.65 | 1.00e-03 | 1.00e-03 | 1.36 |
cysteine | V | – | – | 0.65 | 1.00e-03 | 1.00e-03 | 1.90 |
8,11,14-eicosatrienoic acid, methyl ester | – | – | – | 0.57 | 1.00e-03 | 1.00e-03 | 1.28 |
5,8,11,14-eicosatetraenoic acid, methyl ester | – | – | – | 0.57 | 1.00e-03 | 1.00e-03 | 1.33 |
serine | V | – | – | 0.57 | 1.00e-03 | 1.00e-03 | 1.90 |
9,12-octadecadienoic acid (Z,Z)-, methyl ester | – | – | – | 0.57 | 1.00e-03 | 1.00e-03 | 1.30 |
ethanolamine | – | – | – | 0.56 | 1.00e-03 | 1.00e-03 | 1.88 |
hexadecanoic acid, methyl ester | – | – | – | 0.52 | 1.00e-03 | 1.00e-03 | 1.36 |
methyl stearate | – | – | – | 0.47 | 1.00e-03 | 1.00e-03 | 1.45 |
1,2-propanediol | – | – | – | 0.44 | 1.00e-03 | 1.00e-03 | 1.03 |
glycerol-1-phosphate | – | – | – | 0.39 | 1.00e-03 | 1.00e-03 | 1.77 |
1-monolinoleoylglycerol | – | – | – | 0.39 | 1.00e-03 | 1.00e-03 | 1.57 |
hypotaurine | – | – | – | 0.39 | 1.00e-03 | 1.00e-03 | 1.66 |
glutamic acid | – | – | – | 0.38 | 1.00e-03 | 1.00e-03 | 1.72 |
4,7,10,13,16,19-docosahexaenoic acid, methyl ester | – | – | – | 0.37 | 1.00e-03 | 1.00e-03 | 1.82 |
hypoxanthine | – | – | – | 0.31 | 1.00e-03 | 1.00e-03 | 1.88 |
benzoic acid | – | – | – | 0.27 | 1.00e-03 | 1.00e-03 | 1.96 |
xanthine | – | – | – | 0.25 | 1.00e-03 | 1.00e-03 | 1.61 |
1-monooleoylglycerol | V | – | – | 0.24 | 1.00e-03 | 1.00e-03 | 1.43 |
ethylene glycol | – | – | – | 0.23 | 1.00e-03 | 1.00e-03 | 1.94 |
ribose | – | – | – | 0.09 | 1.00e-03 | 1.00e-03 | 1.67 |
aspartic acid | – | – | – | 0.08 | 1.00e-03 | 1.00e-03 | 1.81 |
serotonin | – | – | – | 0.07 | 1.00e-03 | 1.00e-03 | 1.94 |
inosine | – | – | – | 0.05 | 1.00e-03 | 1.00e-03 | 1.44 |
glycylglycine | – | – | – | 0.04 | 1.00e-03 | 1.00e-03 | 1.98 |
Metabolite | Author-emphasized biomarkers | Cutoff value | AUROC (95%CI) | Sensitivity (%) | Specificity (%) | Accuracy (%) |
---|---|---|---|---|---|---|
oxalic acid | – | – | – | – | – | – |
phosphate | – | – | – | – | – | – |
isocitrate | – | – | – | – | – | – |
pyruvic acid | – | – | – | – | – | – |
glycolic acid | – | – | – | – | – | – |
fumaric acid | – | – | – | – | – | – |
hydroxylamine | – | – | – | – | – | – |
porphine | – | – | – | – | – | – |
leucine | – | – | – | – | – | – |
cholesta-3,5-diene | – | – | – | – | – | – |
stearic acid | – | – | – | – | – | – |
hydroxyurea | – | – | – | – | – | – |
cholesterol | – | – | – | – | – | – |
beta-alanine | – | – | – | – | – | – |
palmitic acid | – | – | – | – | – | – |
2-hydroxyglutaric acid | – | – | – | – | – | – |
docosahexaenoic acid | – | – | – | – | – | – |
2-monopalmitoylglycerol | – | – | – | – | – | – |
11,14-eicosadienoic acid | – | – | – | – | – | – |
myristic acid | – | – | – | – | – | – |
pyroglutamic acid | – | – | – | – | – | – |
lauric acid | – | – | – | – | – | – |
linoleic acid | – | – | – | – | – | – |
glyceric acid | – | – | – | – | – | – |
glycerol | – | – | – | – | – | – |
7,10,13,16-docosatetraenoic acid | – | – | – | – | – | – |
L-threonic acid | – | – | – | – | – | – |
citrulline | – | – | – | – | – | – |
phenylalanine | – | – | – | – | – | – |
9-octadecenoic acid, methyl ester | – | – | – | – | – | – |
linolenic acid | – | – | – | – | – | – |
glycine | – | – | – | – | – | – |
cysteine | V | – | – | – | – | – |
8,11,14-eicosatrienoic acid, methyl ester | – | – | – | – | – | – |
5,8,11,14-eicosatetraenoic acid, methyl ester | – | – | – | – | – | – |
serine | V | – | – | – | – | – |
9,12-octadecadienoic acid (Z,Z)-, methyl ester | – | – | – | – | – | – |
ethanolamine | – | – | – | – | – | – |
hexadecanoic acid, methyl ester | – | – | – | – | – | – |
methyl stearate | – | – | – | – | – | – |
1,2-propanediol | – | – | – | – | – | – |
glycerol-1-phosphate | – | – | – | – | – | – |
1-monolinoleoylglycerol | – | – | – | – | – | – |
hypotaurine | – | – | – | – | – | – |
glutamic acid | – | – | – | – | – | – |
4,7,10,13,16,19-docosahexaenoic acid, methyl ester | – | – | – | – | – | – |
hypoxanthine | – | – | – | – | – | – |
benzoic acid | – | – | – | – | – | – |
xanthine | – | – | – | – | – | – |
1-monooleoylglycerol | V | – | – | – | – | – |
ethylene glycol | – | – | – | – | – | – |
ribose | – | – | – | – | – | – |
aspartic acid | – | – | – | – | – | – |
serotonin | – | – | – | – | – | – |
inosine | – | – | – | – | – | – |
glycylglycine | – | – | – | – | – | – |