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Analytical methods

Comparative study #1
Chromatography GC
Ion source EI
Positive/Negative mode
Mass analyzer TOF
Identification level

Sample information

Comparative study #1
Country US
Specimen tissue
Marker function diagnosis
Participants(Case) Cancer type adenocarcinoma
StageI
Number39
Gender (M,F)15, 24
Mean age (range) (M,F)72.33 ± 8.78
Smoking statussmoker, non-smoker
Participants(Control) Type tumor vs. adjacent normal tissue
Number39
Gender (M,F)15, 24
Mean age (range) (M,F)72.33 ± 8.78
Smoking statussmoker, non-smoker

Data processing and metabolite identification

Data processing software BinBase
Database search NIST11, BinBase

Statistical analysis

Differential analysis method OPLS-DA
Classification method
Survival analysis method

Lung cancer-related metabolites identified in the paper

Metabolite Author-emphasized biomarkers Mean concentration (case) Mean concentration (control) Fold change (case/control) P-value FDR VIP
arachidic acid 3.50 0.14
inosine 5'-monophosphate 3.50 8.50e-04
lysine 2.70 6.50e-05
xanthine V 2.70 3.80e-04
adenosine-5-phosphate 2.50 1.00e-03
5,6-dihydrouracil V 2.40 2.40e-07
UDP GlcNAc 2.30 2.20e-05
3-phosphoglycerate 2.20 1.00e-03
alpha-tocopherol V 2.20 4.10e-07
glycerol-3-galactoside 2.20 3.00e-03
gluconic acid 2.10 3.80e-04
octadecanol 2.10 0.38
glucose V 2.00 3.70e-04
ornithine 1.90 9.60e-06
5'-deoxy-5'-methylthioadenosine V 1.80 6.50e-05
cytidine-5-monophosphate 1.80 1.00e-03
methioninesulfoxide 1.80 0.04
ribitol 1.80 6.60e-07
2-hydroxyglutaric acid 1.70 3.00e-03
4-hydroxyproline 1.70 0.47
maltotriose 1.70 0.61
trehalose 1.70 0.52
238267 trisaccharide 1.60 0.18
5-aminovaleric acid 1.60 0.31
allantoic acid 1.60 5.00e-03
ascorbic acid 1.60 0.74
biuret 1.60 2.00e-03
cellobiotol 1.60 0.44
citric acid 1.60 7.00e-03
cysteine 1.60 3.00e-03
erythronic acid lactone 1.60 6.00e-03
histidine 1.60 0.01
maltose 1.60 0.47
adenine 1.50 3.70e-04
arachidonic acid 1.50 7.00e-03
citrulline 1.50 4.00e-03
dihydrosphingosine 1.50 5.40e-04
fucose 1.50 8.00e-03
N-acetyl-D-mannosamine 1.50 3.30e-04
3-phenyllactic acid 1.40 0.15
arabitol 1.40 3.00e-03
creatinine 1.40 0.01
glutamic acid 1.40 2.00e-03
glyceric acid 1.40 0.02
inositol-4-monophosphate 1.40 0.02
mannitol 1.40 0.02
nicotinamide 1.40 6.00e-03
phosphoethanolamine 1.40 0.29
proline 1.40 8.00e-03
sorbitol 1.40 0.84
spermidine 1.40 2.00e-03
triethanolamine 1.40 2.00e-03
uracil 1.40 0.04
uric acid 1.40 0.02
uridine 1.40 2.00e-03
xylitol 1.40 9.40e-04
2-phenylpropanol 1.30 0.05
4-hydroxybutyric acid 1.30 4.00e-03
acetophenone 1.30 0.18
adenosine 1.30 0.06
adipic acid 1.30 0.16
aminomalonic acid 1.30 0.03
arabinose 1.30 4.50e-04
caprylic acid 1.30 2.00e-03
cystine 1.30 0.18
digalacturonic acid 1.30 0.47
dodecanol 1.30 2.00e-03
fructose-6-phosphate 1.30 0.19
hydroxylamine 1.30 0.01
isothreonic acid 1.30 8.00e-03
kynurenine 1.30 0.12
malic acid 1.30 0.04
phenylethylamine 1.30 0.51
quinic acid 1.30 0.02
succinic acid 1.30 0.73
sucrose 1.30 0.31
tagatose 1.30 0.02
taurine 1.30 0.10
trans-4-hydroxyproline 1.30 8.00e-03
1,5-anhydroglucitol 1.20 0.04
1-monostearin 1.20 0.05
2-ketoisocaproic acid 1.20 0.28
2-monopalmitin 1.20 0.13
alanine 1.20 0.01
asparagine 1.20 0.18
azelaic acid 1.20 0.18
capric acid 1.20 4.00e-03
cysteine-glycine 1.20 0.10
erythronic acid 1.20 0.05
ethanolamine 1.20 0.17
FAD 1.20 0.09
fructose 1.20 0.56
galactose-6-phosphate 1.20 0.15
gamma-tocopherol V 1.20 1.00e-02
glucose-6-phosphate 1.20 0.19
glycerol 1.20 0.02
glycerol-alpha-phosphate 1.20 0.23
glycerol-beta-phosphate 1.20 0.20
glycocyamine 1.20 0.39
isoleucine 1.20 0.12
lauric acid 1.20 0.04
orotic acid 1.20 0.39
palmitic acid 1.20 0.03
pelargonic acid 1.20 0.03
pentadecanoic acid (C15:0) 1.20 0.01
phosphoric acid 1.20 0.18
stearic acid 1.20 0.05
threonic acid 1.20 0.65
thymine 1.20 0.31
tryptophan 1.20 0.84
UDP-glucuronic acid 1.20 7.00e-03
1-monopalmitin 1.10 0.05
2-aminoadipic acid 1.10 0.77
2-hydroxybutanoic acid 1.10 0.18
2-monoolein 1.10 0.36
3-aminoisobutyric acid 1.10 0.28
3-hydroxybutanoic acid 1.10 0.52
5-hydroxynorvaline 1.10 0.46
5-methoxytryptamine 1.10 0.72
allo-inositol 1.10 0.19
benzoic acid 1.10 0.04
beta-alanine 1.10 0.38
dihydroabietic acid 1.10 0.87
dodecane 1.10 0.28
ethanol phosphate N 1.10 0.84
glutamine 1.10 0.65
glycine 1.10 0.20
guanine 1.10 0.25
homoserine 1.10 0.39
hydroxycarbamate 1.10 0.19
hypoxanthine 1.10 0.39
indole-3-acetate 1.10 0.39
inosine 1.10 0.39
isoheptadecanoic acid (methyl-C16:0) 1.10 0.18
leucine 1.10 0.38
linoleic acid 1.10 0.42
mannose 1.10 0.54
methanolphosphate 1.10 0.20
methionine 1.10 0.41
myristic acid 1.10 0.08
N-methylalanine 1.10 0.83
octadecane-1,12-diol N 1.10 0.13
oleic acid 1.10 0.66
oxalic acid 1.10 0.43
oxoproline 1.10 0.09
pantothenic acid 1.10 0.72
phenylalanine 1.10 0.33
phenylpyruvic acid 1.10 0.20
pipecolic acid 1.10 0.12
putrescine 1.10 0.73
salicylaldehyde 1.10 0.37
serine 1.10 0.76
shikimic acid 1.10 0.84
threitol 1.10 0.18
threonine 1.10 0.29
tyrosine 1.10 0.43
uridine-5'-monophosphate 1.10 0.56
xanthosine 1.10 0.83
1-hexadecanol 1.00 0.44
alpha-ketoglutaric acid 1.00 0.84
aspartic acid 1.00 0.64
behenic acid 1.00 0.64
cholesterol 1.00 0.66
conduritol-beta-epoxide 1.00 0.69
cytidine-5-diphosphate 1.00 0.93
eicosenoic acid 1.00 0.64
erythritol 1.00 0.81
fructose-1-phosphate 1.00 0.70
fumaric acid 1.00 0.84
glucuronic acid 1.00 0.85
glycolic acid 1.00 0.51
guanosine 1.00 0.84
levoglucosan 1.00 0.85
maleimide 1.00 0.84
myo-inositol 1.00 0.84
pseudo uridine 1.00 0.85
pyrophosphate 1.00 0.67
ribonic acid 1.00 0.38
ribose 1.00 0.70
stigmasterol 1.00 0.95
urea 1.00 0.61
valine 1.00 0.85
Metabolite Author-emphasized biomarkers Cutoff value AUROC (95%CI) Sensitivity (%) Specificity (%) Accuracy (%)
arachidic acid
inosine 5'-monophosphate
lysine
xanthine V
adenosine-5-phosphate
5,6-dihydrouracil V
UDP GlcNAc
3-phosphoglycerate
alpha-tocopherol V
glycerol-3-galactoside
gluconic acid
octadecanol
glucose V
ornithine
5'-deoxy-5'-methylthioadenosine V
cytidine-5-monophosphate
methioninesulfoxide
ribitol
2-hydroxyglutaric acid
4-hydroxyproline
maltotriose
trehalose
238267 trisaccharide
5-aminovaleric acid
allantoic acid
ascorbic acid
biuret
cellobiotol
citric acid
cysteine
erythronic acid lactone
histidine
maltose
adenine
arachidonic acid
citrulline
dihydrosphingosine
fucose
N-acetyl-D-mannosamine
3-phenyllactic acid
arabitol
creatinine
glutamic acid
glyceric acid
inositol-4-monophosphate
mannitol
nicotinamide
phosphoethanolamine
proline
sorbitol
spermidine
triethanolamine
uracil
uric acid
uridine
xylitol
2-phenylpropanol
4-hydroxybutyric acid
acetophenone
adenosine
adipic acid
aminomalonic acid
arabinose
caprylic acid
cystine
digalacturonic acid
dodecanol
fructose-6-phosphate
hydroxylamine
isothreonic acid
kynurenine
malic acid
phenylethylamine
quinic acid
succinic acid
sucrose
tagatose
taurine
trans-4-hydroxyproline
1,5-anhydroglucitol
1-monostearin
2-ketoisocaproic acid
2-monopalmitin
alanine
asparagine
azelaic acid
capric acid
cysteine-glycine
erythronic acid
ethanolamine
FAD
fructose
galactose-6-phosphate
gamma-tocopherol V
glucose-6-phosphate
glycerol
glycerol-alpha-phosphate
glycerol-beta-phosphate
glycocyamine
isoleucine
lauric acid
orotic acid
palmitic acid
pelargonic acid
pentadecanoic acid (C15:0)
phosphoric acid
stearic acid
threonic acid
thymine
tryptophan
UDP-glucuronic acid
1-monopalmitin
2-aminoadipic acid
2-hydroxybutanoic acid
2-monoolein
3-aminoisobutyric acid
3-hydroxybutanoic acid
5-hydroxynorvaline
5-methoxytryptamine
allo-inositol
benzoic acid
beta-alanine
dihydroabietic acid
dodecane
ethanol phosphate N
glutamine
glycine
guanine
homoserine
hydroxycarbamate
hypoxanthine
indole-3-acetate
inosine
isoheptadecanoic acid (methyl-C16:0)
leucine
linoleic acid
mannose
methanolphosphate
methionine
myristic acid
N-methylalanine
octadecane-1,12-diol N
oleic acid
oxalic acid
oxoproline
pantothenic acid
phenylalanine
phenylpyruvic acid
pipecolic acid
putrescine
salicylaldehyde
serine
shikimic acid
threitol
threonine
tyrosine
uridine-5'-monophosphate
xanthosine
1-hexadecanol
alpha-ketoglutaric acid
aspartic acid
behenic acid
cholesterol
conduritol-beta-epoxide
cytidine-5-diphosphate
eicosenoic acid
erythritol
fructose-1-phosphate
fumaric acid
glucuronic acid
glycolic acid
guanosine
levoglucosan
maleimide
myo-inositol
pseudo uridine
pyrophosphate
ribonic acid
ribose
stigmasterol
urea
valine

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