Cancer DEIso
Home
Search Potential Cancer Markers
Search Potentially Induced Cancers
Survival Analysis
Stage Comparison Plot
Download
tutorial
Contact
Search differentially expressed (DE) genes/[mRNA isoforms] between two conditions (cancer stages)
Search :
DE Genes
DE Isoforms
Select a cancer :
Adrenal Gland (Adrenocortical Carcinoma) cancer
Bile Duct cancer
Bladder cancer
Breast cancer
Colon cancer
Esophagus cancer
Eye cancer
Head and Neck cancer
Kidney (Kidney Chromophobe) cancer
Kidney (Kidney Renal Clear Cell Carcinoma) cancer
Kidney (Kidney Renal Papillary Cell Carcinoma) cancer
Liver cancer
Lung (Lung Adenocarcinoma) cancer
Lung (Lung Squamous Cell Carcinoma) cancer
Pancreas cancer
Pleura cancer
Rectum cancer
Skin cancer
Stomach cancer
Testis cancer
Thyroid cancer
Select two stages :
Condition2
Condition1
vs.
Define differential expression :
Fold Change of Average FPKM
Condition2 / Condition1
≥
≤
Statistical Significance
Test
KS test
T test
U test
Cuffdiff DE test
Direction
Greater (Condition2 > Condition1)
Less (Condition2 < Condition1)
Two sided (Condition 2 != Condition 1)
q-value cutoff
Search
